Scheduled maintenance is in progress... Some features may be unavailable

SCREEN logo
Downloads
About
Help
Screen Helix

Search Candidate cis-Regulatory Elements

I'm searching for cCRE's in:
Enter a gene, cCRE, variant or locus

Try "SOX4", "rs9466027", or "chr12:53380176-53416446"

Looking to search multiple regions? Click here!
Multiple Region Search
Search By

Drag and drop a .tsv file

or

Where to start?

Browse these example searches to get started with SCREEN. You can search for genes, cCREs, variants, or specific loci.

chr8:12,000,000-12,500,000

Gene: APOE

chr19:50,417,519-50,417,853

cCRE: EH38E3314260

chr6:21,298,226-21,298,227

Variant: rs9466027

Access SCREEN Data Instantly!

Download comprehensive datasets of candidate cis-Regulatory Elements (cCREs) from ENCODE for in-depth analysis.

Available Downloads

✅ cCRE Annotations

✅ Data Matrices across multiple assays

✅ cCREs downloads by Genomic Region

Go to Downloads
📈 Trending Datasets
All Candidate Enhancers

(129.1 MB)

All Candidate Enhancers

(129.1 MB)

All Candidate Enhancers

(129.1 MB)

All Candidate Enhancers

(129.1 MB)

All Candidate Enhancers

(129.1 MB)

All Candidate Enhancers

(129.1 MB)

Logo

Search Candidate Regulatory Elements by ENCODE

Copyright © Weng Lab, Moore Lab 2025.

How to Cite the ENCODE Encyclopedia, the Registry of cCREs, and SCREEN:
"ENCODE Project Consortium, et al. Nature 2020."

About us
SCREENWeng LabMoore LabENCODE ConsortiumUMass Chan Medical School
Explore/Tools
PsychScreenigSCREENFactorbook
Data
DownloadsVersion History
Help
API DocumentationCitationsContact Us/Feedback